dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00308
Location and strand information: 5023 - 8031 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00309
Location and strand information: 8067 - 9557 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00310
Location and strand information: 9582 - 11684 (+)
Family: GH43_28|CBM32|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0214
Protein molecular weight: 78859.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00311
Location and strand information: 11711 - 13093 (+)
Family: GH144
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.012
Protein molecular weight: 51909.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00312
Location and strand information: 13117 - 15432 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 5.1622
Protein molecular weight: 84056.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00313
Location and strand information: 15593 - 17821 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 5.3696
Protein molecular weight: 81404.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00314
Location and strand information: 17855 - 19009 (-)
Family: 2.A.1.2.14
Protein type: TC
Protein description: Putative transporter AraJ

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00315
Location and strand information: 19739 - 20854 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00316
Location and strand information: 20940 - 22007 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00317
Location and strand information: 22099 - 23520 (-)
Family: GH57
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6709
Protein molecular weight: 54268.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00318
Location and strand information: 23535 - 24785 (-)
Family: GT4
Protein type: CAZyme
Protein description: D-inositol-3-phosphate glycosyltransferase
Protein isoelectric point: 5.9036
Protein molecular weight: 46927.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00319
Location and strand information: 24830 - 26788 (-)
Family: GH133
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8939
Protein molecular weight: 73605.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00320
Location and strand information: 27453 - 28688 (-)
Family: 1.I.1.1.3
Protein type: TC
Protein description: Serine/threonine-protein kinase PknD

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00321
Location and strand information: 28825 - 30156 (-)
Family: ATPase_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00322
Location and strand information: 30509 - 31819 (-)
Family: 1.I.1.1.3
Protein type: TC
Protein description: ATP-dependent RNA helicase DbpA

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00323
Location and strand information: 31891 - 32361 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00324
Location and strand information: 32527 - 33453 (-)
Family: null
Protein type: null
Protein description: Malate dehydrogenase

Gene clsuter ID: MGYG000004213_5|CGC1
Gene ID: MGYG000004213_00325
Location and strand information: 33550 - 35280 (-)
Family: 2.A.17.4.2
Protein type: TC
Protein description: Dipeptide and tripeptide permease A

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004213_00310	GH43_e146\|CBM32_e99
MGYG000004213_00311	GH144_e3\|3.2.1.71	beta-glucan
MGYG000004213_00312	GH3_e0\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan
MGYG000004213_00313	GH3_e134\|3.2.1.21	beta-glucan
MGYG000004213_00317	GH57_e8
MGYG000004213_00318	GT4_e65
MGYG000004213_00319	GH133_e0

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-glucan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004213_00308	TonB-dependent receptor SusC	TC	5023	8031	+	1.B.14.6.1
MGYG000004213_00309	SusD-like protein	null	8067	9557	+	SusD-like_3\| SusD_RagB
MGYG000004213_00310	hypothetical protein	CAZyme	9582	11684	+	GH43_28\| CBM32\| GH43
MGYG000004213_00311	hypothetical protein	CAZyme	11711	13093	+	GH144
MGYG000004213_00312	Beta-glucosidase BoGH3B	CAZyme	13117	15432	+	GH3
MGYG000004213_00313	Beta-glucosidase BoGH3A	CAZyme	15593	17821	+	GH3
MGYG000004213_00314	Putative transporter AraJ	TC	17855	19009	-	2.A.1.2.14
MGYG000004213_00315	hypothetical protein	null	19739	20854	+	Sel1\| Sel1\| Sel1\| Sel1\| Sel1
MGYG000004213_00316	hypothetical protein	null	20940	22007	-	DUF1573\| DUF1573
MGYG000004213_00317	hypothetical protein	CAZyme	22099	23520	-	GH57
MGYG000004213_00318	D-inositol-3-phosphate glycosyltransferase	CAZyme	23535	24785	-	GT4
MGYG000004213_00319	hypothetical protein	CAZyme	24830	26788	-	GH133
MGYG000004213_00320	Serine/threonine-protein kinase PknD	TC	27453	28688	-	1.I.1.1.3
MGYG000004213_00321	hypothetical protein	STP	28825	30156	-	ATPase_2
MGYG000004213_00322	ATP-dependent RNA helicase DbpA	TC	30509	31819	-	1.I.1.1.3
MGYG000004213_00323	hypothetical protein	null	31891	32361	-	Thioredoxin
MGYG000004213_00324	Malate dehydrogenase	null	32527	33453	-	Ldh_1_N\| Ldh_1_C
MGYG000004213_00325	Dipeptide and tripeptide permease A	TC	33550	35280	-	2.A.17.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature